BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C04SP1|AL429030
(853 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1362 1659 0.0
3x_Contig1586 224 2e-58
>3x_Contig1362
Length = 8864
Score = 1659 bits (836), Expect = 0.0
Identities = 851/854 (99%), Gaps = 2/854 (0%)
Strand = Plus / Plus
Query: 1 gatcaggttacgttctgtttttgcccctttcttttcaaaatccaggaatagacaagatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4617 gatcaggttacgttctgtttttgcccctttcttttcaaaatccaggaatagacaagatcc 4676
Query: 61 catagtaattgagtggtgttgcaatgtatctgaatgggtctcaaataacatgctgtacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4677 catagtaattgagtggtgttgcaatgtatctgaatgggtctcaaataacatgctgtacca 4736
Query: 121 taccggtaccgtaacttcacatctggctggtggtatatgtkaaattacaatcacggacca 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4737 taccggtaccgtaacttcacatctggctggtggtatatgtgaaattacaatcacggacca 4796
Query: 181 tctctttgtgggatttacaggttacccggaggtaacaacccactcaccacataatttaac 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4797 tctctttgtgggatttacaggttacccggaggtaaca-cccactcaccacataatttaac 4855
Query: 241 actcagttttcaattttcttggtatactttatattagacaaaccaaaacaaactgccttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4856 actcagttttcaattttcttggtatactttatattagacaaaccaaaacaaactgccttg 4915
Query: 301 taccacaggtttcgcgtctgagatgcgaagtgcagagca-gccactcgtggctagaaacc 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4916 taccacaggtttcgcgtctgagatgcgaagtgcagagcacgccactcgtggctagaaacc 4975
Query: 360 caggtcgatttcttacggaaacggggccgtcgcatttactatggacttttgcgatggcag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4976 caggtcgatttcttacggaaacggggccgtcgcatttactatggacttttgcgatggcag 5035
Query: 420 gaggagagaaatgaatagacacatcccagaaggggaagtaggatgagaccaattttttct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5036 gaggagagaaatgaatagacacatcccagaaggggaagtaggatgagaccaattttttct 5095
Query: 480 tttgcggaaattgtgtgaaactctgggaatgagaacaggacatgaaccagaagtgacagg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5096 tttgcggaaattgtgtgaaactctgggaatgagaacaggacatgaaccagaagtgacagg 5155
Query: 540 agactagtgcaccagtgcctcaagttttttaagccccttgttttcaactatataaaaggc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5156 agactagtgcaccagtgcctcaagttttttaagccccttgttttcaactatataaaaggc 5215
Query: 600 ttgatcttgagaattatctttttcacctattacagtttgaattatattaattctgattta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5216 ttgatcttgagaattatctttttcacctattacagtttgaattatattaattctgattta 5275
Query: 660 ctgttaatattggcataaaacatccaagacagtataatcacacacaatggctagaaccaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5276 ctgttaatattggcataaaacatccaagacagtataatcacacacaatggctagaaccaa 5335
Query: 720 gcaaacagcaagaaagtctactggtggtaaagccccaagaaaacaactagcctccaaggc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5336 gcaaacagcaagaaagtctactggtggtaaagccccaagaaaacaactagcctccaaggc 5395
Query: 780 tgctagaaaatccgctccatctactggtggtgttaagaagcctcacagatataagccagg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5396 tgctagaaaatccgctccatctactggtggtgttaagaagcctcacagatataagccagg 5455
Query: 840 taccgttgccttga 853
||||||||||||||
Sbjct: 5456 taccgttgccttga 5469
>3x_Contig1586
Length = 12315
Score = 224 bits (113), Expect = 2e-58
Identities = 143/153 (93%)
Strand = Plus / Plus
Query: 701 acacaatggctagaaccaagcaaacagcaagaaagtctactggtggtaaagccccaagaa 760
|||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 10566 acacaatggccagaaccaagcaaacagcaagaaagtccactggtggtaaagcaccaagaa 10625
Query: 761 aacaactagcctccaaggctgctagaaaatccgctccatctactggtggtgttaagaagc 820
| ||| |||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 10626 agcaattagcctccaaggctgccagaaagtccgcaccatcaactggtggtgtcaagaagc 10685
Query: 821 ctcacagatataagccaggtaccgttgccttga 853
|||||||||||||||||||||||||||||||||
Sbjct: 10686 ctcacagatataagccaggtaccgttgccttga 10718
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5994
Number of Sequences: 1807
Number of extensions: 5994
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 2
length of query: 853
length of database: 10,358,551
effective HSP length: 16
effective length of query: 837
effective length of database: 10,329,639
effective search space: 8645907843
effective search space used: 8645907843
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)